Transcriptome analysis of genes related to cadmium absorprion and transportation in pepper

<p>Heavy metal<a> pollution</a> has become a serious global problem in soil contamination. Cadmium (Cd) is a ubiquitous environmental toxic pollutant to plants, which can greatly affect their growth and development, or even lead to their death. In the present study, we performed a comparative transcriptome analysis to identify the regulators and pathways that were involved in Cd absorption and transportation in the roots, leaves and fruits of wild-type and mutant pepper plants. A total of 883,591,943 million reads were mapped to the reference genome, and 33,927 genes were identified. Sample reads and the reference genome alignment efficiency were between 78.99% to 84.57%. Finally, 798 differentially expressed genes (DEGs) were identified in the roots, leaves and fruits of the mutant and wild-type plants, including 80 up-regulated DEGs and 718 down-regulated DEGs. The DGEs were mostly related to the phenylpropanoid biosynthesis pathway and glyoxylate and dicarboxylate metabolism. In addition, some vital DEGs were identified in absorption/transportation-related pathways, such as ABC transporter and P-type ATPase. The results revealed that several genes were related to the regulation of Cd absorption and<a></a><a> transportation</a>. Collectively, our findings provided valuable insights into the molecular mechanism of Cd absorption and transportation in pepper.</p>